Microscopic neural image registration based on the structure of mitochondria

	Microscopic neural image registration based on the structure of mitochondria
	Cao HW(曹会文); Han H(韩华); Rao Q(饶强); Xiao C(肖驰); Chen X(陈曦); Chen X(陈曦)
	2017-04
会议名称	SPIE Medical Imaging
会议日期	2017-02-10至2017-02-16
会议地点	Orlando Florida
摘要	Microscopic image registration is a key component of the neural structure reconstruction with serial sections of neural tissue. The goal of microscopic neural image registration is to recover the 3D continuity and geometrical properties of specimen. During image registration, various distortions need to be corrected, including image rotation, translation, tissue deformation et.al, which come from the procedure of sample cutting, staining and imaging. Furthermore, there is only certain similarity between adjacent sections, and the degree of similarity depends on local structure of the tissue and the thickness of the sections. These factors make the microscopic neural image registration a challenging problem. To tackle the difficulty of corresponding landmarks extraction, we introduce a novel image registration method for Scanning Electron Microscopy (SEM) images of serial neural tissue sections based on the structure of mitochondria. The ellipsoidal shape of mitochondria ensures that the same mitochondria has similar shape between adjacent sections, and its characteristic of broad distribution in the neural tissue guarantees that landmarks based on the mitochondria distributed widely in the image. The proposed image registration method contains three parts: landmarks extraction between adjacent sections, corresponding landmarks matching and image deformation based on the correspondences. We demonstrate the performance of our method with SEM images of drosophila brain.
关键词	Neural Image Registration Scanning Electron Microscopy (Sem) Mitochondria Structure Landmarks
文献类型	会议论文
条目标识符	http://ir.ia.ac.cn/handle/173211/14635
专题	脑图谱与类脑智能实验室_微观重建与智能分析
通讯作者	Chen X(陈曦)
作者单位	中国科学院自动化研究所
第一作者单位	中国科学院自动化研究所
推荐引用方式 GB/T 7714	Cao HW,Han H,Rao Q,et al. Microscopic neural image registration based on the structure of mitochondria[C],2017.

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