BRANT: A Versatile and Extendable Resting-State fMRI Toolkit

doi:10.3389/fninf.2018.00052

	BRANT: A Versatile and Extendable Resting-State fMRI Toolkit
	Xu, Kaibin1,2,3,4 ; Liu, Yong1,2,5,6 ; Zhan, Yafeng 1,7; Ren, Jiaji1,2,5 ; Jiang, Tianzi1,2,6,8,9
发表期刊	FRONTIERS IN NEUROINFORMATICS
	2018-09-03
卷号	12 期号:-页码:52
文章类型	Article
摘要	Data processing toolboxes for resting-state functional MRI (rs-fMRI) have provided us with a variety of functions and user friendly graphic user interfaces (GUIs). However, many toolboxes only cover a certain range of functions, and use exclusively designed GUIs. To facilitate data processing and alleviate the burden of manually drawing GUIs, we have developed a versatile and extendable MATLAB-based toolbox, BRANT (BRAinNetome fmri Toolkit), with a wide range of rs-fMRI data processing functions and code-generated GUIs. During the implementation, we have also empowered the toolbox with parallel computing techniques, efficient file handling methods for compressed file format, and one-line scripting. In BRANT, users can find rs-fMRI batch processing functions for preprocessing, brain spontaneous activity analysis, functional connectivity analysis, complex network analysis, statistical analysis, and results visualization, while developers can quickly publish scripts with code-generated GUIs.
关键词	BRANT resting-state fMRI code-generated GUI preprocessing visualization
WOS标题词	Science & Technology ; Life Sciences & Biomedicine
DOI	10.3389/fninf.2018.00052
关键词[WOS]	MILD COGNITIVE IMPAIRMENT ; INTRINSIC FUNCTIONAL CONNECTIVITY ; HUMAN CONNECTOME PROJECT ; FALSE DISCOVERY RATE ; ALZHEIMERS-DISEASE ; MOTION ARTIFACT ; CORTICAL NETWORKS ; CEREBRAL-CORTEX ; BRAIN NETWORKS ; GLOBAL SIGNAL
收录类别	SCIE
语种	英语
项目资助者	National Key R&D Program of China(2016YFC1305904) ; National Natural Science Foundation of China(81571062 ; Strategic Priority Research Program of Chinese Academy of Science(XDBS1020200) ; Youth Innovation Promotion Association CAS(2014119) ; 81471120)
WOS研究方向	Mathematical & Computational Biology ; Neurosciences & Neurology
WOS类目	Mathematical & Computational Biology ; Neurosciences
WOS记录号	WOS:000443504200001
引用统计	被引频次：56[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.ia.ac.cn/handle/173211/21823
专题	脑图谱与类脑智能实验室_脑网络组研究
通讯作者	Liu, Yong
作者单位	1.Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing, China 2.National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China 3.Sino-Danish Center for Education and Research, Beijing, China 4.Sino-Danish College, University of Chinese Academy of Sciences, Beijing, China 5.School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China 6.CAS Center for Excellence in Brain Science, Institute of Automation, Chinese Academy of Sciences, Beijing, China 7.School of Biomedical Engineering, Southern Medical University, Guangzhou, China 8.Key Laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China 9.Queensland Brain Institute, University of Queensland, Brisbane, QLD, Australia
第一作者单位	中国科学院自动化研究所; 模式识别国家重点实验室
通讯作者单位	中国科学院自动化研究所; 模式识别国家重点实验室
推荐引用方式 GB/T 7714	Xu, Kaibin,Liu, Yong,Zhan, Yafeng,et al. BRANT: A Versatile and Extendable Resting-State fMRI Toolkit[J]. FRONTIERS IN NEUROINFORMATICS,2018,12(-):52.
APA	Xu, Kaibin,Liu, Yong,Zhan, Yafeng,Ren, Jiaji,&Jiang, Tianzi.(2018).BRANT: A Versatile and Extendable Resting-State fMRI Toolkit.FRONTIERS IN NEUROINFORMATICS,12(-),52.
MLA	Xu, Kaibin,et al."BRANT: A Versatile and Extendable Resting-State fMRI Toolkit".FRONTIERS IN NEUROINFORMATICS 12.-(2018):52.

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