Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images
Shu, Chang1,2; Xin, Tong1,2; Zhou, Fangxu1,3; Chen, Xi1; Han, Hua3,4,5
发表期刊Brain Sciences
2020
卷号10期号:2页码:86
通讯作者Chen, Xi(xi.chen@ia.ac.cn) ; Han, Hua(hua.han@ia.ac.cn)
摘要

It remains a mystery as to how neurons are connected and thereby enable us to think, and volume reconstruction from series of microscopy sections of brains is a vital technique in determining this connectivity. Image registration is a key component; the aim of image registration is to estimate the deformation field between two images. Current methods choose to directly regress the deformation field; however, this task is very challenging. It is common to trade off computational complexity with precision when designing complex models for deformation field estimation. This approach is very inefficient, leading to a long inference time. In this paper, we suggest that complex models are not necessary and solve this dilemma by proposing a dual-network architecture. We divide the deformation field prediction problem into two relatively simple subproblems and solve each of them on one branch of the proposed dual network. The two subproblems have completely opposite properties, and we fully utilize these properties to simplify the design of the dual network. These simple architectures enable high-speed image registration. The two branches are able to work together and make up for each other's drawbacks, and no loss of accuracy occurs even when simple architectures are involved. Furthermore, we introduce a series of loss functions to enable the joint training of the two networks in an unsupervised manner without introducing costly manual annotations. The experimental results reveal that our method outperforms state-of-the-art methods in fly brain electron microscopy image registration tasks, and further ablation studies enable us to obtain a comprehensive understanding of each component of our network.

关键词Computer Vision Image Processing Deep Learning Image Registration Electron Microscopy Image Dual Network Architecture Unsupervised Learning
DOI10.3390/brainsci10020086
关键词[WOS]RECONSTRUCTION ; VOLUME
收录类别SCI
语种英语
资助项目National Science Foundation of China[61673381] ; National Science Foundation of China[61701497] ; Special Program of Beijing Municipal Science and Technology Commission[Z181100000118002] ; Strategic Priority Research Program of Chinese Academy of Science[XDB32030200] ; Instrument function development innovation program of Chinese Academy of Sciences[282019000057] ; Bureau of International Cooperation, CAS[153D31KYSB20170059]
项目资助者National Science Foundation of China ; Special Program of Beijing Municipal Science and Technology Commission ; Strategic Priority Research Program of Chinese Academy of Science ; Instrument function development innovation program of Chinese Academy of Sciences ; Bureau of International Cooperation, CAS
WOS研究方向Neurosciences & Neurology
WOS类目Neurosciences
WOS记录号WOS:000519243400035
出版者Brain Sciences
七大方向——子方向分类图像视频处理与分析
引用统计
被引频次:1[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.ia.ac.cn/handle/173211/38525
专题脑图谱与类脑智能实验室_微观重建与智能分析
通讯作者Chen, Xi; Han, Hua
作者单位1.Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
2.School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing 100049, China
3.School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
4.The Center for Excellence in Brain Science and Intelligence Technology, CAS, Shanghai 200031, China
5.National Laboratory of Pattern Recognition, CASIA, Beijing 100190, China
第一作者单位中国科学院自动化研究所
通讯作者单位中国科学院自动化研究所
推荐引用方式
GB/T 7714
Shu, Chang,Xin, Tong,Zhou, Fangxu,et al. Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images[J]. Brain Sciences,2020,10(2):86.
APA Shu, Chang,Xin, Tong,Zhou, Fangxu,Chen, Xi,&Han, Hua.(2020).Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images.Brain Sciences,10(2),86.
MLA Shu, Chang,et al."Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images".Brain Sciences 10.2(2020):86.
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