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Virus Identification in Electron Microscopy Images by Residual Mixed Attention Network 期刊论文
Computer Methods and Programs in Biomedicine, 2021, 卷号: 198, 期号: 198, 页码: 105766
Authors:  Xiao, Chi;  Chen, Xi;  Xie, Qiwei;  Li, Guoqing;  Xiao, Hao;  Song, Jingdong;  Han, Hua
View  |  Adobe PDF(2439Kb)  |  Favorite  |  View/Download:29/2  |  Submit date:2020/10/24
Virus identification  viral morphology  transmission electron microscopy  deep learning  attention mechanism  
Brain activity regulates loose coupling between mitochondrial and cytosolic Ca2+ transients 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 13
Authors:  Lin, Yuan;  Li, Lin-Lin;  Nie, Wei;  Liu, Xiaolei;  Adler, Avital;  Xiao, Chi;  Lu, Fujian;  Wang, Liping;  Han, Hua;  Wang, Xianhua;  Gan, Wen-Biao;  Cheng, Heping
Favorite  |  View/Download:58/0  |  Submit date:2020/03/30
基于深度学习的微观脑连接图谱重建方法研究 学位论文
, 北京: 中国科学院大学, 2019
Authors:  肖驰
Adobe PDF(15060Kb)  |  Favorite  |  View/Download:132/2  |  Submit date:2019/06/14
微观脑连接图谱  电子显微图像  卷积神经网络  深度学习  图像分割  
Brain activity regulates loose coupling between mitochondrial and cytosolic Ca2+ transients 期刊论文
NATURE COMMUNICATIONS, 2019, 期号: 10, 页码: 13
Authors:  Yuan Lin;  Lin-Lin Li;  Wei Nie;  Xiao lei Liu;  Adler, Avital;  Chi Xiao;  Fujian Lu;  Liping Wang;  Hua Han;  Xianhua Wang;  Wen-Biao Gan;  Heping Cheng
View  |  Adobe PDF(3557Kb)  |  Favorite  |  View/Download:9/2  |  Submit date:2020/10/14
PROTEIN-KINASE-II  ESSENTIAL COMPONENT  DENDRITIC SPINES  MOTOR CORTEX  CALCIUM  DYSFUNCTION  FREQUENCY  DYNAMICS  DISEASE  ER  
A fast forward 3D connection algorithm for mitochondria and synapse segmentations from serial EM images 期刊论文
BIODATA MINING, 2018, 卷号: 11, 页码: 15
Authors:  Li, Weifu;  Liu, Jing;  Xiao, Chi;  Deng, Hao;  Xie, Qiwei;  Han, Hua
Favorite  |  View/Download:112/0  |  Submit date:2019/01/08
3D connection  EM images  Bwconncomp  Mitochondria  Synapse  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
Authors:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
View  |  Adobe PDF(3873Kb)  |  Favorite  |  View/Download:141/13  |  Submit date:2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
Deep Contextual Residual Network for Electron Microscopy Image Segmentation in Connectomics 会议论文
, 2018-4, 美国华盛顿
Authors:  Xiao C(肖驰);  Liu J(刘静);  Chen X(陈曦);  Han H(韩华);  Shu C(舒畅);  Xie QW(谢启伟)
View  |  Adobe PDF(614Kb)  |  Favorite  |  View/Download:180/71  |  Submit date:2019/05/10
Connectomics, Deep Learning, Image Segmentation, Electron Microscopy  
An effective fully deep convolutional neural network for mitochondria segmentation based on ATUM-SEM 会议论文
, 美国休斯敦, 2018-2
Authors:  Xiao C(肖驰);  Li WF(李伟夫);  Chen X(陈曦);  Han H(韩华);  Xie QW(谢启伟)
View  |  Adobe PDF(1314Kb)  |  Favorite  |  View/Download:121/35  |  Submit date:2019/05/10
Electron Microscope, Deep learning, Mitochondria segmentation  
Non-iterative simultaneous rigid registration method for serial sections of biological tissue 会议论文
, Washington, DC, USA, 4-7 April 2018
Authors:  Shu, Chang;  Chen, Xi;  Xie, Qiwei;  Xiao, Chi;  Han, Hua
View  |  Adobe PDF(353Kb)  |  Favorite  |  View/Download:135/39  |  Submit date:2018/10/08
serial section  microscopic image  volume reconstruction  constrained simultaneous registration problem  rigid transformation  non-iterative  
Effective automated pipeline for 3D reconstruction of synapses based on deep learning 期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 1, 页码: 263
Authors:  Xiao, Chi;  Li, Weifu;  Deng, Hao;  Chen, Xi;  Yang, Yang;  Xie, QiWei;  Han, Hua
View  |  Adobe PDF(7961Kb)  |  Favorite  |  View/Download:99/17  |  Submit date:2019/05/06
Electron Microscope, Synapse Detection, Deep Learning, Synapse Segmentation, 3d Reconstruction Of Synapses