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A Method for Identification of Multisynaptic Boutons in Electron Microscopy Image Stack of Mouse Cortex 期刊论文
APPLIED SCIENCES-BASEL, 2019, 卷号: 9, 期号: 13, 页码: 19
Authors:  Deng, Hao;  Ma, Chao;  Han, Hua;  Xie, Qiwei;  Shen, Lijun
Favorite  |  View/Download:7/0  |  Submit date:2019/12/16
electron microscopy  multisynaptic bouton  convolutional neural network  image processing  synapse  neuron  
无权访问的条目 会议论文
Authors:  Chen, Xi;  Shen, Lijun;  Xie, Qiwei;  Han, Hua
Adobe PDF(765Kb)  |  Favorite  |  View/Download:9/0  |  Submit date:2019/10/08
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
Authors:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
View  |  Adobe PDF(3873Kb)  |  Favorite  |  View/Download:82/5  |  Submit date:2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
Deep Contextual Residual Network for Electron Microscopy Image Segmentation in Connectomics 会议论文
, 2018-4, 美国华盛顿
Authors:  Xiao C(肖驰);  Liu J(刘静);  Chen X(陈曦);  Han H(韩华);  Shu C(舒畅);  Xie QW(谢启伟)
View  |  Adobe PDF(614Kb)  |  Favorite  |  View/Download:84/24  |  Submit date:2019/05/10
Connectomics, Deep Learning, Image Segmentation, Electron Microscopy  
An effective fully deep convolutional neural network for mitochondria segmentation based on ATUM-SEM 会议论文
, 美国休斯敦, 2018-2
Authors:  Xiao C(肖驰);  Li WF(李伟夫);  Chen X(陈曦);  Han H(韩华);  Xie QW(谢启伟)
View  |  Adobe PDF(1314Kb)  |  Favorite  |  View/Download:65/21  |  Submit date:2019/05/10
Electron Microscope, Deep learning, Mitochondria segmentation  
Effective automated pipeline for 3D reconstruction of synapses based on deep learning 期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 1, 页码: 263
Authors:  Xiao, Chi;  Li, Weifu;  Deng, Hao;  Chen, Xi;  Yang, Yang;  Xie, QiWei;  Han, Hua
View  |  Adobe PDF(7961Kb)  |  Favorite  |  View/Download:46/10  |  Submit date:2019/05/06
Electron Microscope, Synapse Detection, Deep Learning, Synapse Segmentation, 3d Reconstruction Of Synapses  
An automated pipeline for bouton, spine, and synapse detection of in vivo two-photon images 期刊论文
BIODATA MINING, 2017, 卷号: 10, 期号: 10, 页码: 40
Authors:  Xie, Qiwei;  Chen, Xi;  Deng, Hao;  Liu, Danqian;  Sun, Yingyu;  Zhou, Xiaojuan;  Yang, Yang;  Han, Hua
View  |  Adobe PDF(3659Kb)  |  Favorite  |  View/Download:69/5  |  Submit date:2018/10/09
In Vivo Two-photon imagIng  Synapse  Bouton  Spine  Image Enhancement  
An automated pipeline for mitochondrial segmentation on ATUM-SEM stacks 期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2017, 卷号: 15, 期号: 3, 页码: 1750015
Authors:  Li, Weifu;  Deng, Hao;  Rao, Qiang;  Xie, Qiwei;  Chen, Xi;  Han, Hua
View  |  Adobe PDF(1028Kb)  |  Favorite  |  View/Download:88/20  |  Submit date:2017/09/12
Atum-sem  Membrane Enhancement  Mitochondria  Group-similarity  
Deep Learning and Shapes Similarity for Joint Segmentation and Tracing single Neurons in SEM images 会议论文
, 美国 奥兰多, 2017-2-10
Authors:  Rao Q(饶强);  Xiao C(肖驰);  Han H(韩华);  Shen LJ(沈丽君);  Chen X(陈曦);  Xie QW(谢启伟)
View  |  Adobe PDF(1219Kb)  |  Favorite  |  View/Download:167/88  |  Submit date:2017/06/06
Deep Convolutional Neural Network  Active Contour  Neuron Reconstruction  Membrane Detection Probability Map  Neuron Tracing  
3D reconstruction of synapses with deep learning based on EM Images 会议论文
, 美国奥兰多, 2017-2
Authors:  Xiao C(肖驰);  Rao Q(饶强);  Zhang DD(张丹丹);  Chen X(陈曦);  Han H(韩华);  Xie QW(谢启伟)
View  |  Adobe PDF(1006Kb)  |  Favorite  |  View/Download:51/6  |  Submit date:2019/05/10
Scanning Electron Microscope, Deep Learning, 3d Reconstruction Of Synapses