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Expected affine: A registration method for damaged section in serial sections electron microscopy 期刊论文
FRONTIERS IN NEUROINFORMATICS, 2022, 卷号: 16, 页码: 11
作者:  Xin, Tong;  Shen, Lijun;  Li, Linlin;  Chen, Xi;  Han, Hua
收藏  |  浏览/下载：168/0  |  提交时间：2022/11/14
image registration  SSEM  broken sections  section fold  section crack  
Denoising of scanning electron microscope images for biological ultrastructure enhancement 期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2022, 卷号: 20, 期号: 03, 页码: 21
作者:  Chang, Sheng;  Shen, Lijun;  Li, Linlin;  Chen, Xi;  Han, Hua
Adobe PDF(4726Kb)  |  收藏  |  浏览/下载：234/33  |  提交时间：2022/09/19
SEM  noise model  denoising  variance stabilization transformation  two-stage multi-loss  deep learning  
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：344/155  |  提交时间：2022/07/01
An App knock-in rat model for Alzheimer's disease exhibiting A beta and tau pathologies, neuronal death and cognitive impairments 期刊论文
CELL RESEARCH, 2021, 页码: 19
作者:  Pang, Keliang;  Jiang, Richeng;  Zhang, Wei;  Yang, Zhengyi;  Li, Lin-Lin;  Shimozawa, Makoto;  Tambaro, Simone;  Mayer, Johanna;  Zhang, Baogui;  Li, Man;  Wang, Jiesi;  Liu, Hang;  Yang, Ailing;  Chen, Xi;  Liu, Jiazheng;  Winblad, Bengt;  Han, Hua;  Jiang, Tianzi;  Wang, Weiwen;  Nilsson, Per;  Guo, Wei;  Lu, Bai
收藏  |  浏览/下载：196/0  |  提交时间：2021/12/28
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：265/39  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：259/60  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2020, 卷号: 10, 期号: 3, 页码: 14
作者:  Shu, Chang;  Li, Lin-Lin;  Li, Guoqing;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：332/60  |  提交时间：2020/06/22
image registration  volume reconstruction from series of microscopy sections  constrained simultaneous registration problem  noniterative algorithm  
Brain activity regulates loose coupling between mitochondrial and cytosolic Ca2+ transients 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 13
作者:  Lin, Yuan;  Li, Lin-Lin;  Nie, Wei;  Liu, Xiaolei;  Adler, Avital;  Xiao, Chi;  Lu, Fujian;  Wang, Liping;  Han, Hua;  Wang, Xianhua;  Gan, Wen-Biao;  Cheng, Heping
收藏  |  浏览/下载：282/0  |  提交时间：2020/03/30
An Effective Encoder-Decoder Network for Neural Cell Bodies and Cell Nucleus Segmentation of EM Images 会议论文
, 德国柏林, 2019-7
作者:  Jiang Yi;  Xiao Chi;  Li Linlin;  Shen Lijun;  Chen Xi;  Han Hua
Adobe PDF(6217Kb)  |  收藏  |  浏览/下载：154/45  |  提交时间：2022/06/14
Encoder-Decoder  Electron Microscopy  Neural Cell Bodies  Cell Nucleus  Image Segmentation  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2019, 期号: 3, 页码: 14
作者:  Chang Shu;  Linlin Li;  Guoqing Li;  Xi Chen;  Hua Han
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：162/55  |  提交时间：2020/10/14
image registrationvolume reconstruction from series of microscopy sectionsconstrained simultaneous registration problemnoniterative algorithm