CASIA OpenIR  > 中国科学院分子影像重点实验室
Deep Learning for Virtual Histological Staining of Bright-Field Microscopic Images of Unlabeled Carotid Artery Tissue
Li, Dan1,2; Hui, Hui2,3; Zhang, Yingqian4; Tong, Wei4; Tian, Feng4; Yang, Xin2; Liu, Jie1; Chen, Yundai4; Tian, Jie2,3,5
发表期刊MOLECULAR IMAGING AND BIOLOGY
ISSN1536-1632
2020-06-08
期号22页码:1301-1309
摘要

Purpose Histological analysis of artery tissue samples is a widely used method for diagnosis and quantification of cardiovascular diseases. However, the variable and labor-intensive tissue staining procedures hinder efficient and informative histological image analysis. Procedures In this study, we developed a deep learning-based method to transfer bright-field microscopic images of unlabeled tissue sections into equivalent bright-field images of histologically stained versions of the same samples. We trained a convolutional neural network to build maps between the unstained images and histologically stained images using a conditional generative adversarial network model. Results The results of a blind evaluation by board-certified pathologists illustrate that the virtual staining and standard histological staining images of rat carotid artery tissue sections and those involving different types of stains showed no major differences. Quantification of virtual and histological H&E staining in carotid artery tissue sections showed that the relative errors of intima thickness, intima area, and media area were lower than 1.6 %, 5.6 %, and 12.7 %, respectively. The training time of deep learning network was 12.857 h with 1800 training patches and 200 epoches. Conclusions This virtual staining method significantly mitigates the typically laborious and time-consuming histological staining procedures and could be augmented with other label-free microscopic imaging modalities.

关键词Virtual histological staining Conditional generative adversarial network Blind evaluation Bright-field microscopic imaging
DOI10.1007/s11307-020-01508-6
关键词[WOS]Virtual histological staining ; Conditional generative adversarial network ; Blind evaluation ; Bright-field microscopic imaging
收录类别SCIE
语种英语
资助项目National Key Research and Development Program of China[2017YFA0700401] ; National Key Research and Development Program of China[2016YFC0103803] ; National Key Research and Development Program of China[2017YFA0205200] ; National Natural Science Foundation of China[81671851] ; National Natural Science Foundation of China[81827808] ; National Natural Science Foundation of China[81527805] ; National Natural Science Foundation of China[81571836] ; National Natural Science Foundation of China[81800221] ; National Natural Science Foundation of China[81227901] ; Scientific Instrument R&D Program of the Chinese Academy of Sciences[YJKYYQ20170075] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDB32030200]
项目资助者National Key Research and Development Program of China ; National Natural Science Foundation of China ; Scientific Instrument R&D Program of the Chinese Academy of Sciences ; Strategic Priority Research Program of the Chinese Academy of Sciences
WOS研究方向Radiology, Nuclear Medicine & Medical Imaging
WOS类目Radiology, Nuclear Medicine & Medical Imaging
WOS记录号WOS:000538971900003
出版者SPRINGER
七大方向——子方向分类医学影像处理与分析
引用统计
被引频次:28[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.ia.ac.cn/handle/173211/39794
专题中国科学院分子影像重点实验室
通讯作者Liu, Jie; Chen, Yundai; Tian, Jie
作者单位1.Beijing Jiaotong Univ, Sch Comp & Informat Technol, Dept Biomed Engn, Beijing 100044, Peoples R China
2.Chinese Acad Sci, Inst Automat, CAS Key Lab Mol Imaging, Beijing 100190, Peoples R China
3.Univ Chinese Acad Sci, Beijing 100190, Peoples R China
4.Chinese Peoples Liberat Army Gen Hosp, Dept Cardiol, Beijing 100853, Peoples R China
5.Beihang Univ, Beijing Adv Innovat Ctr Big Data Based Precis Med, Sch Med, Beijing 100083, Peoples R China
第一作者单位中国科学院分子影像重点实验室
通讯作者单位中国科学院分子影像重点实验室
推荐引用方式
GB/T 7714
Li, Dan,Hui, Hui,Zhang, Yingqian,et al. Deep Learning for Virtual Histological Staining of Bright-Field Microscopic Images of Unlabeled Carotid Artery Tissue[J]. MOLECULAR IMAGING AND BIOLOGY,2020(22):1301-1309.
APA Li, Dan.,Hui, Hui.,Zhang, Yingqian.,Tong, Wei.,Tian, Feng.,...&Tian, Jie.(2020).Deep Learning for Virtual Histological Staining of Bright-Field Microscopic Images of Unlabeled Carotid Artery Tissue.MOLECULAR IMAGING AND BIOLOGY(22),1301-1309.
MLA Li, Dan,et al."Deep Learning for Virtual Histological Staining of Bright-Field Microscopic Images of Unlabeled Carotid Artery Tissue".MOLECULAR IMAGING AND BIOLOGY .22(2020):1301-1309.
条目包含的文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
Li2020_Article_DeepL(4159KB)期刊论文作者接受稿开放获取CC BY-NC-SA浏览
个性服务
推荐该条目
保存到收藏夹
查看访问统计
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Li, Dan]的文章
[Hui, Hui]的文章
[Zhang, Yingqian]的文章
百度学术
百度学术中相似的文章
[Li, Dan]的文章
[Hui, Hui]的文章
[Zhang, Yingqian]的文章
必应学术
必应学术中相似的文章
[Li, Dan]的文章
[Hui, Hui]的文章
[Zhang, Yingqian]的文章
相关权益政策
暂无数据
收藏/分享
文件名: Li2020_Article_DeepLearningForVirtualHistolog.pdf
格式: Adobe PDF
此文件暂不支持浏览
所有评论 (0)
暂无评论
 

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。