CASIA OpenIR  > 09年以前成果
Characterizing the dynamic connectivity between genes by variable parameter regression and Kalman filtering based on temporal gene expression data
Cui, QH; Liu, B; Jiang, TX; Ma, SD
Source PublicationBIOINFORMATICS
2005-04-15
Volume21Issue:8Pages:1538-1541
SubtypeArticle
AbstractMotivation: One popular method for analyzing functional connectivity between genes is to cluster genes with similar expression profiles. The most popular metrics measuring the similarity (or dissimilarity) among genes include Pearson's correlation, linear regression coefficient and Euclidean distance. As these metrics only give some constant values, they can only depict a stationary connectivity between genes. However, the functional connectivity between genes usually changes with time. Here, we introduce a novel insight for characterizing the relationship between genes and find out a proper mathematical model, variable parameter regression and Kalman filtering to model it.
WOS HeadingsScience & Technology ; Life Sciences & Biomedicine ; Technology ; Physical Sciences
WOS KeywordCELL-CYCLE
Indexed BySCI
Language英语
WOS Research AreaBiochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Computer Science ; Mathematical & Computational Biology ; Mathematics
WOS SubjectBiochemical Research Methods ; Biotechnology & Applied Microbiology ; Computer Science, Interdisciplinary Applications ; Mathematical & Computational Biology ; Statistics & Probability
WOS IDWOS:000228401800037
Citation statistics
Cited Times:7[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ia.ac.cn/handle/173211/9138
Collection09年以前成果
AffiliationChinese Acad Sci, Natl Lab Pattern Recognit, Inst Automat, Beijing 100080, Peoples R China
Recommended Citation
GB/T 7714
Cui, QH,Liu, B,Jiang, TX,et al. Characterizing the dynamic connectivity between genes by variable parameter regression and Kalman filtering based on temporal gene expression data[J]. BIOINFORMATICS,2005,21(8):1538-1541.
APA Cui, QH,Liu, B,Jiang, TX,&Ma, SD.(2005).Characterizing the dynamic connectivity between genes by variable parameter regression and Kalman filtering based on temporal gene expression data.BIOINFORMATICS,21(8),1538-1541.
MLA Cui, QH,et al."Characterizing the dynamic connectivity between genes by variable parameter regression and Kalman filtering based on temporal gene expression data".BIOINFORMATICS 21.8(2005):1538-1541.
Files in This Item:
There are no files associated with this item.
Related Services
Recommend this item
Bookmark
Usage statistics
Export to Endnote
Google Scholar
Similar articles in Google Scholar
[Cui, QH]'s Articles
[Liu, B]'s Articles
[Jiang, TX]'s Articles
Baidu academic
Similar articles in Baidu academic
[Cui, QH]'s Articles
[Liu, B]'s Articles
[Jiang, TX]'s Articles
Bing Scholar
Similar articles in Bing Scholar
[Cui, QH]'s Articles
[Liu, B]'s Articles
[Jiang, TX]'s Articles
Terms of Use
No data!
Social Bookmark/Share
All comments (0)
No comment.
 

Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.