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CASIA OpenIR
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A novel registration method for long-serial section images of EM with a serial split technique based on unsupervised optical flow network 期刊论文
BIOINFORMATICS, 2023, 卷号: 39, 期号: 8, 页码: 11
作者:  Xin, Tong;  Lv, Yanan;  Chen, Haoran;  Li, Linlin;  Shen, Lijun;  Shan, Guangcun;  Chen, Xi;  Han, Hua
收藏  |  浏览/下载：112/0  |  提交时间：2023/11/17
An intelligent workflow for sub-nanoscale 3D reconstruction of intact synapses from serial section electron tomography 期刊论文
BMC BIOLOGY, 2023, 卷号: 21, 期号: 1, 页码: 14
作者:  Chang, Sheng;  Li, Linlin;  Hong, Bei;  Liu, Jing;  Xu, Yuxuan;  Pang, Keliang;  Zhang, Lina;  Han, Hua;  Chen, Xi
收藏  |  浏览/下载：87/0  |  提交时间：2023/11/16
Serial section electron tomography  3D EM  Semi-auto locating  Auto-alignment  Missing-information restoration  Semi-auto segmentation  Workflow  Synapse  
STDIN: Spatio-temporal distilled interpolation for electron microscope images 期刊论文
NEUROCOMPUTING, 2022, 卷号: 505, 页码: 188-202
作者:  Wang, Zejin;  Sun, Guodong;  Li, Guoqing;  Shen, Lijun;  Zhang, Lina;  Han, Hua
Adobe PDF(6579Kb)  |  收藏  |  浏览/下载：247/23  |  提交时间：2022/11/14
Spatio-temporal ensemble  Feedback distillation  Electron microscope interpolation  
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：320/78  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：391/161  |  提交时间：2022/07/01
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：311/41  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：243/35  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
Human attention-inspired volume reconstruction method on serial section electron microscopy images 期刊论文
CYTOMETRY PART A, 2021, 页码: 11
作者:  Zhou, Fangxu;  Shen, Lijun;  Chen, Bohao;  Chen, Xi;  Hua, Han
收藏  |  浏览/下载：221/0  |  提交时间：2021/04/27
3D volume reconstruction  electron microscopy image  image registration  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：280/38  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
Virus Identification in Electron Microscopy Images by Residual Mixed Attention Network 期刊论文
Computer Methods and Programs in Biomedicine, 2021, 卷号: 198, 期号: 198, 页码: 105766
作者:  Xiao, Chi;  Chen, Xi;  Xie, Qiwei;  Li, Guoqing;  Xiao, Hao;  Song, Jingdong;  Han, Hua
浏览  |  Adobe PDF(2439Kb)  |  收藏  |  浏览/下载：331/73  |  提交时间：2020/10/24
Virus identification  viral morphology  transmission electron microscopy  deep learning  attention mechanism