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Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics 期刊论文
Computer Methods and Programs in Biomedicine, 2022, 卷号: 219, 页码: 106759
作者:  Xiao, Chi;  Hong, Bei;  Liu, Jing;  Tang, Yuanyan;  Xie, Qiwei;  Han, Hua
Adobe PDF(2731Kb)  |  收藏  |  浏览/下载：233/58  |  提交时间：2023/01/12
Deep learning  Neuronal structure segmentation  Subpixel convolution  Electron microscopy  Micro-Connectomics  
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：317/78  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
The development of cortical functional hierarchy is associated with the molecular organization of prenatal/postnatal periods 期刊论文
CEREBRAL CORTEX, 2022, 页码: 14
作者:  Zhao, Yuxin;  Wang, Meng;  Hu, Ke;  Wang, Qi;  Lou, Jing;  Fan, Lingzhong;  Liu, Bing
Adobe PDF(1943Kb)  |  收藏  |  浏览/下载：249/40  |  提交时间：2022/11/14
cortical development  fMRI  gene expression  postnatal  prenatal  
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：309/41  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：242/35  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
An App knock-in rat model for Alzheimer's disease exhibiting A beta and tau pathologies, neuronal death and cognitive impairments 期刊论文
CELL RESEARCH, 2021, 页码: 19
作者:  Pang, Keliang;  Jiang, Richeng;  Zhang, Wei;  Yang, Zhengyi;  Li, Lin-Lin;  Shimozawa, Makoto;  Tambaro, Simone;  Mayer, Johanna;  Zhang, Baogui;  Li, Man;  Wang, Jiesi;  Liu, Hang;  Yang, Ailing;  Chen, Xi;  Liu, Jiazheng;  Winblad, Bengt;  Han, Hua;  Jiang, Tianzi;  Wang, Weiwen;  Nilsson, Per;  Guo, Wei;  Lu, Bai
收藏  |  浏览/下载：233/0  |  提交时间：2021/12/28
Pairwise interactions in gene expression determine a hierarchical transcriptional profile in the human brain 期刊论文
Science Bulletin, 2021, 卷号: 66, 期号: 无, 页码: 无
作者:  Hua, Jiaojiao;  Yang, Zhengyi;  Jiang, Tianzi;  Yu, Shan
Adobe PDF(3690Kb)  |  收藏  |  浏览/下载：224/50  |  提交时间：2021/06/17
Gene-gene interaction  Co-expression  Structural networkFunctional network  Functional network  Higher-order interactions  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：279/38  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
Nanobar array assay revealed complementary roles of BIN1 splice isoforms in cardiac T-tubule morphogenesis 期刊论文
Nano Letters, 2020, 卷号: 20, 期号: 20, 页码: 9
作者:  Lin-Lin Li;  Qian-Jin Guo;  Hsin-Ya Lou;  Jing-Hui Liang;  Yang Yang;  Xin Xing;  Hong-Tao Li;  Jing Han;  Shan Shen;  Hui Li;  Haihong Ye;  Hao Di Wu;  Bianxiao Cui;  Shi-Qiang Wang
Adobe PDF(7678Kb)  |  收藏  |  浏览/下载：236/48  |  提交时间：2020/10/14
nanopillar array BIN1 splicing isoforms T-tubule muscle contraction heart disease  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：292/67  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction