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A robust transformer-based pipeline of 3D cell alignment, denoise and instance segmentation on electron microscopy sequence images 期刊论文
Journal of Plant Physiology, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Yafeng, Zheng;  Limei, Lin;  Jingyue, Guo;  Yanan, Lv;  Jingbin, Yuan;  Hao, Zhai;  Xi, Chen;  Lijun, Shen;  LinLin, Li;  Shunong, Bai;  Hua, Han
Adobe PDF(15549Kb)  |  收藏  |  浏览/下载：36/10  |  提交时间：2024/06/11
Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics 期刊论文
Computer Methods and Programs in Biomedicine, 2022, 卷号: 219, 页码: 106759
作者:  Xiao, Chi;  Hong, Bei;  Liu, Jing;  Tang, Yuanyan;  Xie, Qiwei;  Han, Hua
Adobe PDF(2731Kb)  |  收藏  |  浏览/下载：321/78  |  提交时间：2023/01/12
Deep learning  Neuronal structure segmentation  Subpixel convolution  Electron microscopy  Micro-Connectomics  
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：380/86  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Robust Frequency-Aware Instance Segmentation for Serial Tissue Sections 会议论文
, 韩国济州岛, 2021-11-12
作者:  Sun GD(孙国栋);  Wang ZJ(王泽锦);  Li GQ(李国庆);  Han H(韩华)
Adobe PDF(1188Kb)  |  收藏  |  浏览/下载：258/65  |  提交时间：2022/06/15
Serial sections  Instance segmentation  Computer vision  
Using Scale Information to Improve SIFT-Based Electron Microscope Image Registration Method 会议论文
, 中国浙江省杭州市, 2019-9
作者:  Chen BH(陈波昊);  Chang S(常胜);  Chen X(陈曦);  Han H(韩华)
Adobe PDF(554Kb)  |  收藏  |  浏览/下载：185/64  |  提交时间：2022/06/14
SIFT  Image Registration  RANSAC  Electron Microscope  
UTR: UNSUPERVISED LEARNING OF THICKNESS-INSENSITIVE REPRESENTATIONS FOR ELECTRON MICROSCOPE IMAGE 会议论文
, 美国阿拉斯加, 2021-10
作者:  Xin T(辛桐);  Chen BH(陈波昊);  Chen X(陈曦);  Han H(韩华)
Adobe PDF(2365Kb)  |  收藏  |  浏览/下载：255/51  |  提交时间：2022/06/14
Feature Descriptor  Unsupervised learning  Electron Microscopy  Image registration  FIB-SEM  
An Effective Encoder-Decoder Network for Neural Cell Bodies and Cell Nucleus Segmentation of EM Images 会议论文
, 德国柏林, 2019-7
作者:  Jiang Yi;  Xiao Chi;  Li Linlin;  Shen Lijun;  Chen Xi;  Han Hua
Adobe PDF(6217Kb)  |  收藏  |  浏览/下载：231/61  |  提交时间：2022/06/14
Encoder-Decoder  Electron Microscopy  Neural Cell Bodies  Cell Nucleus  Image Segmentation  
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：272/41  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
Application of Horseradish Peroxidase Labeling Along With Post-Staining Improves Data Quality in Micro-Brain Connectomics 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2020, 卷号: 47, 期号: 10, 页码: 1090-1096
作者:  Wang Sheng-Xiong;  Chen Zhen-Qiang;  Han Hua;  Guo Ai-Ke
收藏  |  浏览/下载：179/0  |  提交时间：2021/01/06
brain connectomics  volume electron microscopy  sample preparation  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2019, 期号: 3, 页码: 14
作者:  Chang Shu;  Linlin Li;  Guoqing Li;  Xi Chen;  Hua Han
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：212/66  |  提交时间：2020/10/14
image registrationvolume reconstruction from series of microscopy sectionsconstrained simultaneous registration problemnoniterative algorithm