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CASIA OpenIR
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Denoising of scanning electron microscope images for biological ultrastructure enhancement 期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2022, 卷号: 20, 期号: 03, 页码: 21
作者:  Chang, Sheng;  Shen, Lijun;  Li, Linlin;  Chen, Xi;  Han, Hua
Adobe PDF(4726Kb)  |  收藏  |  浏览/下载：286/39  |  提交时间：2022/09/19
SEM  noise model  denoising  variance stabilization transformation  two-stage multi-loss  deep learning  
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：394/162  |  提交时间：2022/07/01
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：312/42  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：244/35  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：282/39  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：295/68  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2020, 卷号: 10, 期号: 3, 页码: 14
作者:  Shu, Chang;  Li, Lin-Lin;  Li, Guoqing;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：383/65  |  提交时间：2020/06/22
image registration  volume reconstruction from series of microscopy sections  constrained simultaneous registration problem  noniterative algorithm  
无权访问的条目 期刊论文
作者:  Sun, Rong;  Chen, Xi;  Yin, Chun-Ying;  Qi, Lei;  Lau, Pak-Ming;  Han, Hua;  Bi, Guo-Qiang
Adobe PDF(4047Kb)  |  收藏  |  浏览/下载：74/8  |  提交时间：2019/07/12
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：439/81  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
Large scale three-dimensional reconstruction of an entire &ITCaenorhabditis elegans&IT larva using AutoCUTS-SEM 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2017, 卷号: 200, 期号: 2, 页码: 87-96
作者:  Li, Xixia;  Ji, Gang;  Chen, Xi;  Ding, Wei;  Sun, Lei;  Xu, Wei;  Han, Hua;  Sun, Fei
浏览  |  Adobe PDF(1537Kb)  |  收藏  |  浏览/下载：419/164  |  提交时间：2018/10/10
Automation  Caenorhabditis Elegans  Scanning Electron Microscopy  3d Reconstruction  Volume Electron Microscopy