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Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：313/78  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：276/38  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2020, 卷号: 10, 期号: 3, 页码: 14
作者:  Shu, Chang;  Li, Lin-Lin;  Li, Guoqing;  Chen, Xi;  Han, Hua
Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：376/62  |  提交时间：2020/06/22
image registration  volume reconstruction from series of microscopy sections  constrained simultaneous registration problem  noniterative algorithm  
Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images 期刊论文
Brain Sciences, 2020, 卷号: 10, 期号: 2, 页码: 86
作者:  Shu, Chang;  Xin, Tong;  Zhou, Fangxu;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(1388Kb)  |  收藏  |  浏览/下载：259/56  |  提交时间：2020/04/27
Computer Vision  Image Processing  Deep Learning  Image Registration  Electron Microscopy Image  Dual Network Architecture  Unsupervised Learning  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2019, 期号: 3, 页码: 14
作者:  Chang Shu;  Linlin Li;  Guoqing Li;  Xi Chen;  Hua Han
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：182/57  |  提交时间：2020/10/14
image registrationvolume reconstruction from series of microscopy sectionsconstrained simultaneous registration problemnoniterative algorithm  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：428/77  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
An automated pipeline for mitochondrial segmentation on ATUM-SEM stacks 期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2017, 卷号: 15, 期号: 3, 页码: 1750015
作者:  Li, Weifu;  Deng, Hao;  Rao, Qiang;  Xie, Qiwei;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(1028Kb)  |  收藏  |  浏览/下载：355/129  |  提交时间：2017/09/12
Atum-sem  Membrane Enhancement  Mitochondria  Group-similarity