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CASIA OpenIR
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A robust transformer-based pipeline of 3D cell alignment, denoise and instance segmentation on electron microscopy sequence images 期刊论文
Journal of Plant Physiology, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Yafeng, Zheng;  Limei, Lin;  Jingyue, Guo;  Yanan, Lv;  Jingbin, Yuan;  Hao, Zhai;  Xi, Chen;  Lijun, Shen;  LinLin, Li;  Shunong, Bai;  Hua, Han
Adobe PDF(15549Kb)  |  收藏  |  浏览/下载：25/7  |  提交时间：2024/06/11
STDIN: Spatio-temporal distilled interpolation for electron microscope images 期刊论文
NEUROCOMPUTING, 2022, 卷号: 505, 页码: 188-202
作者:  Wang, Zejin;  Sun, Guodong;  Li, Guoqing;  Shen, Lijun;  Zhang, Lina;  Han, Hua
Adobe PDF(6579Kb)  |  收藏  |  浏览/下载：273/26  |  提交时间：2022/11/14
Spatio-temporal ensemble  Feedback distillation  Electron microscope interpolation  
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：260/39  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
Human attention-inspired volume reconstruction method on serial section electron microscopy images 期刊论文
CYTOMETRY PART A, 2021, 页码: 11
作者:  Zhou, Fangxu;  Shen, Lijun;  Chen, Bohao;  Chen, Xi;  Hua, Han
收藏  |  浏览/下载：246/0  |  提交时间：2021/04/27
3D volume reconstruction  electron microscopy image  image registration  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：307/43  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：319/73  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2020, 卷号: 10, 期号: 3, 页码: 14
作者:  Shu, Chang;  Li, Lin-Lin;  Li, Guoqing;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：402/70  |  提交时间：2020/06/22
image registration  volume reconstruction from series of microscopy sections  constrained simultaneous registration problem  noniterative algorithm  
Dual Networks for High-Precision and High-Speed Registration of Brain Electron Microscopy Images 期刊论文
Brain Sciences, 2020, 卷号: 10, 期号: 2, 页码: 86
作者:  Shu, Chang;  Xin, Tong;  Zhou, Fangxu;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(1388Kb)  |  收藏  |  浏览/下载：296/65  |  提交时间：2020/04/27
Computer Vision  Image Processing  Deep Learning  Image Registration  Electron Microscopy Image  Dual Network Architecture  Unsupervised Learning  
Scalable volumetric imaging for ultrahigh-speed brain mapping at synaptic resolution 期刊论文
NATIONAL SCIENCE REVIEW, 2019, 卷号: 6, 期号: 5, 页码: 982-992
作者:  Wang, Hao;  Zhu, Qingyuan;  Ding, Lufeng;  Shen, Yan;  Yang, Chao-Yu;  Xu, Fang;  Shu, Chang;  Guo, Yujie;  Xiong, Zhiwei;  Shan, Qinghong;  Jia, Fan;  Su, Peng;  Yang, Qian-Ru;  Li, Bing;  Cheng, Yuxiao;  He, Xiaobin;  Chen, Xi;  Wu, Feng;  Zhou, Jiang-Ning;  Xu, Fuqiang;  Han, Hua;  Lau, Pak-Ming;  Bi, Guo-Qiang
浏览  |  Adobe PDF(25368Kb)  |  收藏  |  浏览/下载：463/74  |  提交时间：2020/03/30
fluorescence microscopy  brain mapping  tissue clearing  immunostaining  activity trace mapping  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：461/84  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics