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CASIA OpenIR
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A robust transformer-based pipeline of 3D cell alignment, denoise and instance segmentation on electron microscopy sequence images 期刊论文
Journal of Plant Physiology, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Yafeng, Zheng;  Limei, Lin;  Jingyue, Guo;  Yanan, Lv;  Jingbin, Yuan;  Hao, Zhai;  Xi, Chen;  Lijun, Shen;  LinLin, Li;  Shunong, Bai;  Hua, Han
Adobe PDF(15549Kb)  |  收藏  |  浏览/下载：36/10  |  提交时间：2024/06/11
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：381/87  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：432/177  |  提交时间：2022/07/01
An Effective Encoder-Decoder Network for Neural Cell Bodies and Cell Nucleus Segmentation of EM Images 会议论文
, 德国柏林, 2019-7
作者:  Jiang Yi;  Xiao Chi;  Li Linlin;  Shen Lijun;  Chen Xi;  Han Hua
Adobe PDF(6217Kb)  |  收藏  |  浏览/下载：234/62  |  提交时间：2022/06/14
Encoder-Decoder  Electron Microscopy  Neural Cell Bodies  Cell Nucleus  Image Segmentation  
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：356/52  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
Geolocation Error Estimation and Correction on Long-Term MWRI Data 期刊论文
IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 2021, 卷号: 59, 期号: 11, 页码: 9448-9461
作者:  Liu, Jiazheng;  Li, Weifu;  Peng, Jiangtao;  Shen, Lijun;  Han, Hua;  Zhang, Peng;  Yang, Lei
Adobe PDF(8747Kb)  |  收藏  |  浏览/下载：238/14  |  提交时间：2021/12/28
Geology  Sea surface  Satellites  Earth  Instruments  Satellite broadcasting  Microwave radiometry  Geolocation error estimation and correction  Micro-Wave Radiation Imager (MWRI)  nonrigid point set registration  
Virus Identification in Electron Microscopy Images by Residual Mixed Attention Network 期刊论文
Computer Methods and Programs in Biomedicine, 2021, 卷号: 198, 期号: 198, 页码: 105766
作者:  Xiao, Chi;  Chen, Xi;  Xie, Qiwei;  Li, Guoqing;  Xiao, Hao;  Song, Jingdong;  Han, Hua
浏览  |  Adobe PDF(2439Kb)  |  收藏  |  浏览/下载：369/83  |  提交时间：2020/10/24
Virus identification  viral morphology  transmission electron microscopy  deep learning  attention mechanism  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2019, 期号: 3, 页码: 14
作者:  Chang Shu;  Linlin Li;  Guoqing Li;  Xi Chen;  Hua Han
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：213/66  |  提交时间：2020/10/14
image registrationvolume reconstruction from series of microscopy sectionsconstrained simultaneous registration problemnoniterative algorithm  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：330/77  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
Massive Data Management and Sharing Module for Connectome Reconstruction 期刊论文
BRAIN SCIENCES, 2020, 卷号: 10, 期号: 5, 页码: 15
作者:  Yuan, Jingbin;  Zhang, Jing;  Shen, Lijun;  Zhang, Dandan;  Yu, Wenhuan;  Han, Hua
收藏  |  浏览/下载：279/0  |  提交时间：2020/08/03
connectome  massive data management  distributed storage and retrieval  electron microscope image  segmentation result  image cache