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A robust transformer-based pipeline of 3D cell alignment, denoise and instance segmentation on electron microscopy sequence images 期刊论文
Journal of Plant Physiology, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Yafeng, Zheng;  Limei, Lin;  Jingyue, Guo;  Yanan, Lv;  Jingbin, Yuan;  Hao, Zhai;  Xi, Chen;  Lijun, Shen;  LinLin, Li;  Shunong, Bai;  Hua, Han
Adobe PDF(15549Kb)  |  收藏  |  浏览/下载：5/1  |  提交时间：2024/06/11
BrainCog: A spiking neural network based, braininspired cognitive intelligence engine for braininspired AI and brain simulation 期刊论文
Patterns, 2023, 页码: 100789
作者:  Zeng, Yi;  Zhao, Dongcheng;  Zhao, Feifei;  Shen, Guobin;  Dong, Yiting;  Lu, Enmeng;  Zhang, Qian;  Sun, Yinqian;  Liang, Qian;  Zhao, Yuxuan;  Zhao, Zhuoya;  Fang, Hongjian;  Wang, Yuwei;  Li, Yang;  Liu, Xin;  Du, Chengcheng;  Kong, Qingqun;  Zizhe, Ruan;  Weida Bi
Adobe PDF(6608Kb)  |  收藏  |  浏览/下载：7/0  |  提交时间：2024/06/06
A novel registration method for long-serial section images of EM with a serial split technique based on unsupervised optical flow network 期刊论文
BIOINFORMATICS, 2023, 卷号: 39, 期号: 8, 页码: 11
作者:  Xin, Tong;  Lv, Yanan;  Chen, Haoran;  Li, Linlin;  Shen, Lijun;  Shan, Guangcun;  Chen, Xi;  Han, Hua
收藏  |  浏览/下载：125/0  |  提交时间：2023/11/17
基于电镜图像的集成电路金属圆孔自动识别方法及系统 专利
专利类型: 发明专利, 专利号: ZL 2020 1 1396899.5, 申请日期: 2021-02-01,
发明人:  沈丽君;  洪贝;  韩华;  陈曦
Adobe PDF(1323Kb)  |  收藏  |  浏览/下载：256/52  |  提交时间：2023/01/12
Expected affine: A registration method for damaged section in serial sections electron microscopy 期刊论文
FRONTIERS IN NEUROINFORMATICS, 2022, 卷号: 16, 页码: 11
作者:  Xin, Tong;  Shen, Lijun;  Li, Linlin;  Chen, Xi;  Han, Hua
收藏  |  浏览/下载：223/0  |  提交时间：2022/11/14
image registration  SSEM  broken sections  section fold  section crack  
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：342/80  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Fear memory-associated synaptic and mitochondrial changes revealed by deep learning-based processing of electron microscopy data 期刊论文
CELL REPORTS, 2022, 卷号: 40, 期号: 5, 页码: 28
作者:  Liu, Jing;  Qi, Junqian;  Chen, Xi;  Li, Zhenchen;  Hong, Bei;  Ma, Hongtu;  Li, Guoqing;  Shen, Lijun;  Liu, Danqian;  Kong, Yu;  Zhai, Hao;  Xie, Qiwei;  Han, Hua;  Yang, Yang
收藏  |  浏览/下载：319/0  |  提交时间：2022/09/19
Denoising of scanning electron microscope images for biological ultrastructure enhancement 期刊论文
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2022, 卷号: 20, 期号: 03, 页码: 21
作者:  Chang, Sheng;  Shen, Lijun;  Li, Linlin;  Chen, Xi;  Han, Hua
Adobe PDF(4726Kb)  |  收藏  |  浏览/下载：299/41  |  提交时间：2022/09/19
SEM  noise model  denoising  variance stabilization transformation  two-stage multi-loss  deep learning  
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：406/166  |  提交时间：2022/07/01
An Effective Encoder-Decoder Network for Neural Cell Bodies and Cell Nucleus Segmentation of EM Images 会议论文
, 德国柏林, 2019-7
作者:  Jiang Yi;  Xiao Chi;  Li Linlin;  Shen Lijun;  Chen Xi;  Han Hua
Adobe PDF(6217Kb)  |  收藏  |  浏览/下载：209/56  |  提交时间：2022/06/14
Encoder-Decoder  Electron Microscopy  Neural Cell Bodies  Cell Nucleus  Image Segmentation