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An intelligent workflow for sub-nanoscale 3D reconstruction of intact synapses from serial section electron tomography 期刊论文
BMC BIOLOGY, 2023, 卷号: 21, 期号: 1, 页码: 14
作者:  Chang, Sheng;  Li, Linlin;  Hong, Bei;  Liu, Jing;  Xu, Yuxuan;  Pang, Keliang;  Zhang, Lina;  Han, Hua;  Chen, Xi
收藏  |  浏览/下载：84/0  |  提交时间：2023/11/16
Serial section electron tomography  3D EM  Semi-auto locating  Auto-alignment  Missing-information restoration  Semi-auto segmentation  Workflow  Synapse  
Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics 期刊论文
Computer Methods and Programs in Biomedicine, 2022, 卷号: 219, 页码: 106759
作者:  Xiao, Chi;  Hong, Bei;  Liu, Jing;  Tang, Yuanyan;  Xie, Qiwei;  Han, Hua
Adobe PDF(2731Kb)  |  收藏  |  浏览/下载：230/58  |  提交时间：2023/01/12
Deep learning  Neuronal structure segmentation  Subpixel convolution  Electron microscopy  Micro-Connectomics  
Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：316/78  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Fear memory-associated synaptic and mitochondrial changes revealed by deep learning-based processing of electron microscopy data 期刊论文
CELL REPORTS, 2022, 卷号: 40, 期号: 5, 页码: 28
作者:  Liu, Jing;  Qi, Junqian;  Chen, Xi;  Li, Zhenchen;  Hong, Bei;  Ma, Hongtu;  Li, Guoqing;  Shen, Lijun;  Liu, Danqian;  Kong, Yu;  Zhai, Hao;  Xie, Qiwei;  Han, Hua;  Yang, Yang
收藏  |  浏览/下载：286/0  |  提交时间：2022/09/19
An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume 期刊论文
Biomedical Signal Processing and Control, 2021, 卷号: 69, 期号: 无, 页码: 102829
作者:  Liu, Jing;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Tang, Yuanyan;  Han, Hua
Adobe PDF(14559Kb)  |  收藏  |  浏览/下载：242/35  |  提交时间：2022/01/12
Neuron tracing  Electron microscopy  Deep learning  Convolutional LSTM  
Aligned Organization of Synapses and Mitochondria in Auditory Hair Cells 期刊论文
NEUROSCIENCE BULLETIN, 2021, 页码: 14
作者:  Liu, Jing;  Wang, Shengxiong;  Lu, Yan;  Wang, Haoyu;  Wang, Fangfang;  Qiu, Miaoxin;  Xie, Qiwei;  Han, Hua;  Hua, Yunfeng
收藏  |  浏览/下载：235/0  |  提交时间：2021/12/28
Inner hair cell  Ribbon synapse  Mitochondrial network  Volume electron microscopy  AI-based image processing  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：278/38  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
A Computational Model to Investigate GABA-Activated Astrocyte Modulation of Neuronal Excitation 期刊论文
COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE, 2020, 卷号: 2020, 页码: 13
作者:  Li, Licong;  Zhou, Jin;  Sun, Hongji;  Liu, Jing;  Wang, Hongrui;  Liu, Xiuling;  Wang, Changyong
收藏  |  浏览/下载：127/0  |  提交时间：2021/01/07
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：291/67  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
Deep Contextual Residual Network for Electron Microscopy Image Segmentation in Connectomics 会议论文
, 2018-4, 美国华盛顿
作者:  Xiao C(肖驰);  Liu J(刘静);  Chen X(陈曦);  Han H(韩华);  Shu C(舒畅);  Xie QW(谢启伟)
浏览  |  Adobe PDF(614Kb)  |  收藏  |  浏览/下载：317/131  |  提交时间：2019/05/10
Connectomics, Deep Learning, Image Segmentation, Electron Microscopy