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Electron Microscopic Sequential Images Stitching Based on Belief Propagation 会议论文
Eleventh International Conference on Graphics and Image Processing (ICGIP 2019), Hangzhou, China, 12-14 OCTOBER 2019
作者:  Chang, Sheng;  Zhou, Fangxu;  Chen, Xi;  Han, Hua
Adobe PDF(479Kb)  |  收藏  |  浏览/下载：135/50  |  提交时间：2023/06/28
Electron Microscope Image  Sequential Image  Image Stitching  Belief Propagation  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2019, 期号: 3, 页码: 14
作者:  Chang Shu;  Linlin Li;  Guoqing Li;  Xi Chen;  Hua Han
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：197/63  |  提交时间：2020/10/14
image registrationvolume reconstruction from series of microscopy sectionsconstrained simultaneous registration problemnoniterative algorithm  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：313/72  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
A Noniterative Simultaneous Rigid Registration Method for Serial Sections of Biological Tissues 期刊论文
APPLIED SCIENCES-BASEL, 2020, 卷号: 10, 期号: 3, 页码: 14
作者:  Shu, Chang;  Li, Lin-Lin;  Li, Guoqing;  Chen, Xi;  Han, Hua
浏览  |  Adobe PDF(3363Kb)  |  收藏  |  浏览/下载：396/69  |  提交时间：2020/06/22
image registration  volume reconstruction from series of microscopy sections  constrained simultaneous registration problem  noniterative algorithm  
Scalable volumetric imaging for ultrahigh-speed brain mapping at synaptic resolution 期刊论文
NATIONAL SCIENCE REVIEW, 2019, 卷号: 6, 期号: 5, 页码: 982-992
作者:  Wang, Hao;  Zhu, Qingyuan;  Ding, Lufeng;  Shen, Yan;  Yang, Chao-Yu;  Xu, Fang;  Shu, Chang;  Guo, Yujie;  Xiong, Zhiwei;  Shan, Qinghong;  Jia, Fan;  Su, Peng;  Yang, Qian-Ru;  Li, Bing;  Cheng, Yuxiao;  He, Xiaobin;  Chen, Xi;  Wu, Feng;  Zhou, Jiang-Ning;  Xu, Fuqiang;  Han, Hua;  Lau, Pak-Ming;  Bi, Guo-Qiang
浏览  |  Adobe PDF(25368Kb)  |  收藏  |  浏览/下载：452/72  |  提交时间：2020/03/30
fluorescence microscopy  brain mapping  tissue clearing  immunostaining  activity trace mapping  
Deep Contextual Residual Network for Electron Microscopy Image Segmentation in Connectomics 会议论文
, 2018-4, 美国华盛顿
作者:  Xiao C(肖驰);  Liu J(刘静);  Chen X(陈曦);  Han H(韩华);  Shu C(舒畅);  Xie QW(谢启伟)
浏览  |  Adobe PDF(614Kb)  |  收藏  |  浏览/下载：325/137  |  提交时间：2019/05/10
Connectomics, Deep Learning, Image Segmentation, Electron Microscopy  
Effective automated pipeline for 3D reconstruction of synapses based on deep learning 期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 1, 页码: 263
作者:  Xiao, Chi;  Li, Weifu;  Deng, Hao;  Chen, Xi;  Yang, Yang;  Xie, QiWei;  Han, Hua
浏览  |  Adobe PDF(7961Kb)  |  收藏  |  浏览/下载：341/103  |  提交时间：2019/05/06
Electron Microscope, Synapse Detection, Deep Learning, Synapse Segmentation, 3d Reconstruction Of Synapses  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：455/84  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
An automated pipeline for bouton, spine, and synapse detection of in vivo two-photon images 期刊论文
BIODATA MINING, 2017, 卷号: 10, 期号: 10, 页码: 40
作者:  Xie, Qiwei;  Chen, Xi;  Deng, Hao;  Liu, Danqian;  Sun, Yingyu;  Zhou, Xiaojuan;  Yang, Yang;  Han, Hua
浏览  |  Adobe PDF(3659Kb)  |  收藏  |  浏览/下载：564/175  |  提交时间：2018/10/09
In Vivo Two-photon imagIng  Synapse  Bouton  Spine  Image Enhancement  
Non-iterative simultaneous rigid registration method for serial sections of biological tissue 会议论文
, Washington, DC, USA, 4-7 April 2018
作者:  Shu, Chang;  Chen, Xi;  Xie, Qiwei;  Xiao, Chi;  Han, Hua
浏览  |  Adobe PDF(353Kb)  |  收藏  |  浏览/下载：308/109  |  提交时间：2018/10/08
serial section  microscopic image  volume reconstruction  constrained simultaneous registration problem  rigid transformation  non-iterative