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Morphological Process of Spermiogenesis Revealed by Ultrathin Sections-Scanning Electron Microscopy 期刊论文
Acta Biochimica et Biophysica Sinica, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Limei, Lin;  Lina, Zhang;  Hongtu, Ma;  Xi, Chen;  Keliang, Pang;  Linlin, Li;  Hua Han
Microsoft Word(2907Kb)  |  收藏  |  浏览/下载：27/5  |  提交时间：2024/06/11
A robust transformer-based pipeline of 3D cell alignment, denoise and instance segmentation on electron microscopy sequence images 期刊论文
Journal of Plant Physiology, 2024, 页码: 154236
作者:  Jiazheng, Liu;  Yafeng, Zheng;  Limei, Lin;  Jingyue, Guo;  Yanan, Lv;  Jingbin, Yuan;  Hao, Zhai;  Xi, Chen;  Lijun, Shen;  LinLin, Li;  Shunong, Bai;  Hua, Han
Adobe PDF(15549Kb)  |  收藏  |  浏览/下载：29/8  |  提交时间：2024/06/11
Synaptic degeneration in the prefrontal cortex of a rat AD model revealed by volume electron microscopy 期刊论文
Journal of Molecular Cell Biology, 2022, 页码: 已录用
作者:  Yi Jiang;  Linlin Li;  Keliang Pang;  Jiazheng Liu;  Bohao Chen;  Jingbin Yuan;  Lijun Shen;  Xi Chen;  Bai Lu;  Hua Han
Adobe PDF(689Kb)  |  收藏  |  浏览/下载：423/173  |  提交时间：2022/07/01
Three-dimensional ATUM-SEM reconstruction and analysis of hepatic endoplasmic reticulum-organelle interactions 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 9, 页码: 636-645
作者:  Jiang, Yi;  Li, Linlin;  Chen, Xi;  Liu, Jiazheng;  Yuan, Jingbin;  Xie, Qiwei;  Han, Hua
Adobe PDF(1914Kb)  |  收藏  |  浏览/下载：346/50  |  提交时间：2022/01/27
3D reconstruction  ATUM-SEM  deep learning  liver  ER  MCSs  
Automated Silicon-Substrate Ultra-Microtome for Automating the Collection of Brain Sections in Array Tomography 期刊论文
IEEE-CAA JOURNAL OF AUTOMATICA SINICA, 2021, 卷号: 8, 期号: 2, 页码: 389-401
作者:  Cheng, Long;  Liu, Weizhou;  Zhou, Chao;  Zou, Yongxiang;  Hou, Zeng-Guang
Adobe PDF(17687Kb)  |  收藏  |  浏览/下载：304/51  |  提交时间：2021/03/08
Array tomography  automatic collection system  brain sections  microscopic object detection  serial section  
Sparse self-attention aggregation networks for neural sequence slice interpolation 期刊论文
BioData Mining, 2021, 卷号: 14, 期号: 1, 页码: 19
作者:  Wang, Zejin;  Liu, Jing;  Chen, Xi;  Li, Guoqing;  Han, Hua
Adobe PDF(5022Kb)  |  收藏  |  浏览/下载：311/44  |  提交时间：2021/02/18
Slice interpolation  Biological tissue recovery  EM images  Sparse self-attention network  Adaptive style-balance loss  
Application of Horseradish Peroxidase Labeling Along With Post-Staining Improves Data Quality in Micro-Brain Connectomics 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2020, 卷号: 47, 期号: 10, 页码: 1090-1096
作者:  Wang Sheng-Xiong;  Chen Zhen-Qiang;  Han Hua;  Guo Ai-Ke
收藏  |  浏览/下载：176/0  |  提交时间：2021/01/06
brain connectomics  volume electron microscopy  sample preparation  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：321/74  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
Effective automated pipeline for 3D reconstruction of synapses based on deep learning 期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 1, 页码: 263
作者:  Xiao, Chi;  Li, Weifu;  Deng, Hao;  Chen, Xi;  Yang, Yang;  Xie, QiWei;  Han, Hua
浏览  |  Adobe PDF(7961Kb)  |  收藏  |  浏览/下载：348/106  |  提交时间：2019/05/06
Electron Microscope, Synapse Detection, Deep Learning, Synapse Segmentation, 3d Reconstruction Of Synapses  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：466/85  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics