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Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes 期刊论文
BMC Bioinformatics, 2022, 卷号: 23, 期号: 1, 页码: 23
作者:  Hong,Bei;  Liu,Jing;  Zhai,Hao;  Liu,Jiazheng;  Shen,Lijun;  Chen,Xi;  Xie,Qiwei;  Han,Hua
Adobe PDF(3091Kb)  |  收藏  |  浏览/下载：291/75  |  提交时间：2022/11/14
Connectomics  Reconstruction  Connectivity concept  Joint optimization  Electron microscope volumes  
Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics 期刊论文
Computer Methods and Programs in Biomedicine, 2022, 卷号: 219, 页码: 106759
作者:  Xiao, Chi;  Hong, Bei;  Liu, Jing;  Tang, Yuanyan;  Xie, Qiwei;  Han, Hua
Adobe PDF(2731Kb)  |  收藏  |  浏览/下载：203/51  |  提交时间：2023/01/12
Deep learning  Neuronal structure segmentation  Subpixel convolution  Electron microscopy  Micro-Connectomics  
Automatic Reconstruction of Mitochondria and Endoplasmic Reticulum in Electron Microscopy Volumes by Deep Learning 期刊论文
FRONTIERS IN NEUROSCIENCE, 2020, 期号: 14, 页码: 13
作者:  Liu, Jing;  Li, Linlin;  Yang, Yang;  Hong, Bei;  Chen, Xi;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(1944Kb)  |  收藏  |  浏览/下载：275/61  |  提交时间：2020/09/21
mitochondria  endoplasmic reticulum  electron microscopes  segmentation  3D reconstruction  
Automatic Mitochondria Segmentation for EM Data Using a 3D Supervised Convolutional Network 期刊论文
FRONTIERS IN NEUROANATOMY, 2018, 期号: 12, 页码: 92
作者:  Xiao, Chi;  Chen, Xi;  Li, Weifu;  Li, Linlin;  Wang, Lu;  Xie, Qiwei;  Han, Hua
浏览  |  Adobe PDF(3873Kb)  |  收藏  |  浏览/下载：418/73  |  提交时间：2019/01/08
electron microscope  deep learning  volumetric mitochondria segmentation  mitochondria morphology  neuroinformatics  
Effective automated pipeline for 3D reconstruction of synapses based on deep learning 期刊论文
BMC Bioinformatics, 2018, 卷号: 19, 期号: 1, 页码: 263
作者:  Xiao, Chi;  Li, Weifu;  Deng, Hao;  Chen, Xi;  Yang, Yang;  Xie, QiWei;  Han, Hua
浏览  |  Adobe PDF(7961Kb)  |  收藏  |  浏览/下载：307/96  |  提交时间：2019/05/06
Electron Microscope, Synapse Detection, Deep Learning, Synapse Segmentation, 3d Reconstruction Of Synapses  
Morphology-Retained Non-Linear Image Registration of Serial Electron Microscopy Sections 会议论文
, Athens, Greece, 7-10 Oct. 2018
作者:  Chen, Xi;  Xie, Qiwei;  Shen, Lijun;  Han, Hua
浏览  |  Adobe PDF(530Kb)  |  收藏  |  浏览/下载：307/106  |  提交时间：2018/10/08
An automated pipeline for bouton, spine, and synapse detection of in vivo two-photon images 期刊论文
BIODATA MINING, 2017, 卷号: 10, 期号: 10, 页码: 40
作者:  Xie, Qiwei;  Chen, Xi;  Deng, Hao;  Liu, Danqian;  Sun, Yingyu;  Zhou, Xiaojuan;  Yang, Yang;  Han, Hua
浏览  |  Adobe PDF(3659Kb)  |  收藏  |  浏览/下载：533/165  |  提交时间：2018/10/09
In Vivo Two-photon imagIng  Synapse  Bouton  Spine  Image Enhancement  
Deep Learning and Shapes Similarity for Joint Segmentation and Tracing single Neurons in SEM images 会议论文
, 美国 奥兰多, 2017-2-10
作者:  Rao Q(饶强);  Xiao C(肖驰);  Han H(韩华);  Shen LJ(沈丽君);  Chen X(陈曦);  Xie QW(谢启伟)
Adobe PDF(1219Kb)  |  收藏  |  浏览/下载：417/198  |  提交时间：2017/06/06
Deep Convolutional Neural Network  Active Contour  Neuron Reconstruction  Membrane Detection Probability Map  Neuron Tracing  
Automatically Segmenting and Reconstructing Neurons in SEM images 会议论文
ICMA2016 proceedings, 中国 哈尔滨, 2016-8
作者:  Rao Q(饶强);  Han H(韩华);  Li WF(李伟夫);  Shen LJ(沈丽君);  Chen X(陈曦);  Xie QW(谢启伟)
Adobe PDF(1700Kb)  |  收藏  |  浏览/下载：368/137  |  提交时间：2017/06/06
Neuronal Networks Reconstruction  Deep Convolutional Neural Network  Watershed  Neuronal Boundary Detection  Drosophila Mushroom Body.